WebCastrense Savojardo Biocomputing Group, Department of Pharmacy and Biotechnology, University of Bologna, Bologna, Italy These authors contributed equally to this work. Search for more papers by this author Andrea Luchetti, Corresponding Author Andrea Luchetti [email protected] orcid.org/0000-0002-2986-721X WebOct 15, 2014 · Castrense Savojardo 1 , Pier Luigi Martelli 1 , Piero Fariselli 2 , Rita Casadio 1 Affiliations 1 Biocomputing Group, University of Bologna, CIRI-Health Science and …
Prediction of disulfide connectivity in proteins with machine …
WebJun 27, 2014 · Castrense Savojardo, Pier Luigi Martelli, Piero Fariselli, Rita Casadio, TPpred2: improving the prediction of mitochondrial targeting peptide cleavage sites by … WebJan 1, 2024 · Castrense Savojardo, 1 Niccolò Bruciaferri, 1 Giacomo Tartari, 1, 2 Pier Luigi Martelli, 1 and Rita Casadio 1, 2 ... Savojardo C. et al. (2015) TPpred3 detects and discriminates mitochondrial and chloroplastic targeting peptides in eukaryotic proteins. Bioinformatics, 31, 3269–3275. st james coe heysham
Prediction of disulfide connectivity in proteins with machine …
WebMay 29, 2024 · The Critical Assessment of Functional Annotation (CAFA) is an ongoing, global, community-driven effort to evaluate and improve the computational annotation of protein function. Here we report on the results of the third CAFA challenge, CAFA3, that featured an expanded analysis over the previous CAFA rounds, both in terms of volume … WebLoop is the open research network that increases the discoverability and impact of researchers and their work. Loop enables you to stay up-to-date with the latest discoveries and news, connect with researchers and form new collaborations. WebOct 31, 2024 · Proof-of-principle: Successful identification of domains. The embedding-based nearest neighbor search (k-nn) found more diverged/sequence-dissimilar homologous domains than MMseqs2, the state-of-the-art (SOTA) for fast and sensitive sequence-based search. Embeddings from more advanced pLMs clearly outperformed those from simpler … st james cme church tyler tx